# Pattern Miner Prospective Examples

This page gathers together some examples of patterns that we would like to have mined by the Pattern Miner in the relatively near term (written May 1, 2017):

## Contents

# patterns in English and Lojban NLP parses

(Ruiting)

# patterns in PLN inference histories

## Context-free patterns

An example here would be "basic chaining of deductions"

ExecutionOutputLink GroundedSchemaNode "deduction-formula" ListLink ImplicationLink VariableNode "$A" VariableNode "$C" ExecutionOutputLink GroundedSchemaNode "deduction-formula" ListLink ImplicationLink VariableNode "$A" VariableNode "$B" ImplicationLink VariableNode "$A" VariableNode "$B1" ImplicationLink VariableNode "$B1" VariableNode "$B" ExecutionOutputLink GroundedSchemaNode "deduction-formula" ListLink ImplicationLink VariableNode "$B" VariableNode "$C" ImplicationLink VariableNode "$B" VariableNode "$B2" ImplicationLink VariableNode "$B2" VariableNode "$C"

This says

- A implies B1, and B1 implies B, therefore A implies B
- B implies B2, and B2 implies C, therefore B implies C
- A implies B, and B implies C, therefore A implies C

which can be graphically represented by the upside-down inference tree

Implication A B1 Implication B1 B Implication B B2 Implication B2 C --------deduction-formula--------- ---------deduction-formula--------- Implication A B Implication B C -----------------deduction-formula------------------- Implication A C

## Context-dependent patterns

An example would be

InheritanceLink VariableNode "$P" ConceptNode "Person" Inheritance VariableNode "$Q" ConceptNode "Person" ExecutionOutputLink GroundedSchemaNode "deduction-formula" ListLink InheritanceLink VariableNode "$P" VariableNode "$X" ExecutionOutputLink GroundedSchemaNode "sim-to-inh-formula" ListLink InheritanceLink VariableNode "$P" VariableNode "$Q" SimilarityLink VariableNode "$P" VariableNode "$Q" InheritanceLink VariableNode "$Q" VariableNode "$X"

If P and Q are people, then one good way to evaluate if P has a certain property, is to find some similar person Q and assess whether they have that property... Which can be graphically represented by the following inference tree

Similarity P Q -sim-to-inh-fo- Inheritance P Q Inheritance Q X --------deduction-formula--------- Inheritance P X

# patterns in statistically learned NLP parses (from partially learned grammars

(Linas)

# patterns in MOSES models imported to Atomspace

for a gene expression data set, genes over expressed or under expressed together in case samples could indicate a functional pathway or other ontological category differentiating cases from controls.

(AndLink ) (VariableNode $var_1) (VariableNode $var_2)

(AndLink ) (NotLink ) (VariableNode $var_1) (NotLink ) (VariableNode $var_2)

the third possibility is one over expressed gene and one under expressed gene, possibly indicating mutually exclusive pathways/categories

(AndLink ) (VariableNode $var_1) (NotLink ) (VariableNode $var_2)

## patterns spanning said MOSES models, and biological background knowledge

gene ontology (GO) background knowledge corresponding to the respective patterns above

(AndLink ) (MemberLink ) (VariableNode $var_1) (ConceptNode "GO:xxx") (MemberLink ) (VariableNode $var_2) (ConceptNode "GO:xxx")

(AndLink ) (MemberLink ) (VariableNode $var_1) (ConceptNode "GO:yyy") (MemberLink ) (VariableNode $var_2) (ConceptNode "GO:yyy")

(AndLink ) (MemberLink ) (VariableNode $var_1) (ConceptNode "GO:xxx") (MemberLink ) (VariableNode $var_2) (ConceptNode "GO:yyy")